PaRTI-Seq Analysis is designed to overcome the computational and interpretive challenges by turning complex datasets into clear, actionable results. Each sequencing run can generate millions of reads, including microbial genomes, host DNA, and environmental noise. Without carefully curated databases and robust pipelines, even experienced labs can encounter false positives, missed detections, and inefficient sequencing runs.
PaRTI-Seq is the analysis and workflow layer for labs that need more than a sequencing run: host depletion, contamination-controlled extraction, low-input library preparation, and standardized pathogen reporting need to work together.
In research settings, the challenge often lies in interpreting massive datasets and reconciling inconsistent microbial profiles.
In clinical and commercial settings, precision and reproducibility are critical, as analysis errors can undermine diagnostic confidence, delay reporting, and complicate compliance with regulatory standards.
Mis-annotated or contaminated reference sequences
Incorrect pathogen matches due to alignment errors
Host sequences misclassified as microbial reads
Environmental microbes mistakenly identified as clinically relevant organisms
Reduced sensitivity to low-abundance organisms in host-dense samples
PaRTI-Seq Analysis directly addresses these issues with deeply curated reference databases, validated algorithms, and optimized workflows for both research and clinical applications.
PaRTI-Seq RUO Analysis enables faster, less expensive, and more accurate research by reducing the need for in-house bioinformatics, removing specialized hardware requirements, and providing curated outputs through a simple web interface. Researchers can upload sequencing data and receive reproducible results from any computer in any location, with outputs delivered in standard formats for downstream analysis.
Complimentary access for research use
Curated database of more than 1,500 pathogens
Results available in standard formats (.csv, .xlsx)
Secure AWS-based deployment (Singapore region)
Burrows–Wheeler Aligner (BWA) and minimap2 for accurate read mapping
Preset mapping parameters validated on low-biomass human samples
Reduces the need for in-house bioinformatics or IT infrastructure
Ensures consistency across datasets with optimized defaults
Provides access to a rigorously curated pathogen reference database
Enables reproducible analyses from any location with internet access
Delivers results in universally compatible formats for downstream analysis
PaRTI-Seq RUO Analysis is included with the following kits:
ideal for laboratories that want scalable access without the burden of local infrastructure. Data is processed within a protected environment that supports compliance with international data protection standards.
a dedicated local PC that runs PaRTI-Seq Clinical Analysis entirely offline, providing full control over data within the laboratory. This option is suited for institutions with strict privacy requirements or restricted internet connectivity.
Complimentary access for research use
Complimentary access for research use
Complimentary access for research use
Complimentary access for research use
Complimentary access for research use
Complimentary access for research use
Improves diagnostic confidence with validated reference data and QC metrics
Reduces reliance on dedicated bioinformatics resources
Scales to support both routine and high-throughput testing environments
Accelerates reporting through automated, structured outputs
Eases compliance with data protection and regulatory standards
PaRTI-Seq Clinical Analysis is included with the following kits:
Micronbrane Medical technologies enrich our understanding of microorganisms through innovative metagenomic collection devices, novel host depletion, mNGS-grade reagents, advanced metagenomic sequencing assays, automation instrumentation, plus rapid bioinformatic software.
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